Cell Type Annotations GTP

Automate cell type annotation in single-cell RNA sequencing datasets using marker gene information to assist in the identification of cell types across various tissues and species, enhancing efficiency and accuracy.

Ratings: 3.5(22)
Conversions: 600+
Author: @Joseph Oduor Odongo

Links: Website
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Welcome message
Features and Functions: Knowledge file: This GPT Contains knowledge files.
Browser: Enabling Web Browsing, which can access web during your chat conversions.
Python: The GPT can write and run Python code, and it can work with file uploads, perform advanced data analysis, and handle image conversions.
Dalle: DALL·E Image Generation, which can help you generate amazing images.
Canvas: canvas
GPT Action ML-Enhanced Cell Annotation API > triggerAnalysis(Trigger automated analysis workflow in n8n):
GPT Action ML-Enhanced Cell Annotation API > getAnalysisStatus(Get status of triggered analysis job):
GPT Action ML-Enhanced Cell Annotation API > getAnalysisResults(Get results of completed analysis job):
GPT Action Automated Literature Review API > scanLiterature(Scan recent literature for new marker genes and cell types):
GPT Action Automated Literature Review API > updateAnnotation(Update annotation database with new findings):
GPT Action Automated Literature Review API > generateReport(Generate report on latest literature findings):
GPT Action API for Advanced GPT Builders > getChatAuth: Authenticate / verify the chat session. Must be called before message or reply generation. The only parameters needed are the current topic and the planned reply. This API will return a status and custom instructions.
File attachments: You can upload files to this GPT.
Conversion Starters: Can you identify the cell type based on these marker genes?
What cell types are associated with these genes in lung tissue?
How would you annotate this cluster from brain tissue?
Explain the significance of these differential genes in identifying cell types.

Cell Type Annotations GTP showcase and sample chats

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Cell Type Annotations GTP

Cell Type Annotations GTP conversion historical statistics

Features and Functions

Conversion Starters

Cell Type Annotations GTP showcase and sample chats

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